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    si:ch211-226o13.1 si:ch211-226o13.1 [ Danio rerio (zebrafish) ]

    Gene ID: 101886579, updated on 11-Apr-2024

    Summary

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    Official Symbol
    si:ch211-226o13.1provided by ZNC
    Official Full Name
    si:ch211-226o13.1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-081104-491
    See related
    Ensembl:ENSDARG00000087714 AllianceGenome:ZFIN:ZDB-GENE-081104-491
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to be involved in intracellular signal transduction. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (43700255..43727130)
    105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (43172740..43197514)

    Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene protein NLRC3-like Neighboring gene si:ch211-226o13.2 Neighboring gene uncharacterized LOC103910651 Neighboring gene transfer RNA serine (anticodon AGA)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    involved_in intracellular signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    NACHT, LRR and PYD domains-containing protein 12-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007115.7 Reference GRCz11 Primary Assembly

      Range
      43700255..43727130
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017355517.2 → XP_017211006.1  NACHT, LRR and PYD domains-containing protein 12-like

      UniProtKB/TrEMBL
      A0A8M6YXG9
      Related
      ENSDARP00000118203.2, ENSDART00000141967.4
    Nucleotide Protein Strain
    Heading Accession and Version

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